周源（研究員）
人物簡介
2010年本科畢業於首都師範大學生物科學專業，2015年於中國農業大學生物信息學專業獲理學博士學位，後於北京大學醫學部從事博士後研究。現就職於北京大學基礎醫學院醫學信息學系，從事生物信息學研究，目前主要研究興趣為轉錄組學（含非編碼RNA）與表觀轉錄組學數據的計算分析。先後開發了CCPPI、SRAMP等10餘個生物信息學工具，總使用量超過4萬人次。以（含共同）第一或通訊作者在Nucleic Acids Research, Briefings in Bioinformatics等專業期刊上發表SCI論文22篇，其它署名SCI論文15篇。
研究方向
學術成果
論文
1、Zhan Tong, Qinghua Cui, Juan Wang*, Yuan Zhou*. TransmiR v2.0: an updated transcription factor-microRNA regulation database. Nucl Acids Res，2018, in press, doi: 10.1093/nar/gky1023.
2、Jianwei Li*, Xiaofen Han, Yanping Wan, Shan Zhang, Yingshu Zhao, Rui Fan, Qinghua Cui, Yuan Zhou*. TAM 2.0: tool for microRNA set analysis. Nucl Acids Res, 2018, 2018,46(W1):W180-W185.
3、Chunmei Cui#, Weili Yang#, Jiangcheng Shi, Yong Zhou, Jichun Yang, Qinghua Cui*, Yuan Zhou*. Identification and analysis of human sex-biased microRNAs. Genomics, Proteomics Bioinformatics, 2018, 16(3): 200-211.
4、Yuan Zhou*, Qinghua Cui*. Comparative Analysis of Human Genes Frequently and Occasionally Regulated by m6A Modification. Genomics, Proteomics Bioinformatics, 2018, 16(2):127-135.
5、Wenjing Xu#, Yuan Zhou#, Guoheng Xu*, Bin Geng*, Qinghua Cui*. Transcriptome analysis reveals non-identical microRNA profiles between arterial and venous plasma. Oncotarget, 2017, 8(17):28471-28480.
6、Hong Li, Yuan Zhou*, Ziding Zhang*. Network Analysis Reveals a Common Host-Pathogen Interaction Pattern in Arabidopsis Immune Responses. Front Plant Sci, 2017, 8:893.
7、Shiping Yang, Hong Li, Fei He, Yuan Zhou*, Ziding Zhang*. Critical assessment and performance improvement of plant-pathogen protein-protein interaction prediction methods. Brief Bioinform, 2017, in press, doi: 10.1093/bib/bbx123.
8、Yuan Zhou*, Pan Zeng, Yan-Hui Li, Ziding Zhang, Qinghua Cui*. SRAMP: prediction of mammalian N6-methyladenosine (m6A) sites based on sequence-derived features. Nucl Acids Res, 2016,44(10):e91.
9、Yuan Zhou#, Ying-Si Zhou#, Fei He, Jiangning Song*, Ziding Zhang*. Can simple codon pair usage predict protein-protein interaction? Mol Biosyst, 2012, 8(5): 1396-1404.
10、Fei He#, Yuan Zhou#, Ziding Zhang*. Deciphering the Arabidopsis floral transition process by integrating a protein-protein interaction network and gene expression data. Plant Physiol, 2010, 153(4): 1492-1505.[1]